FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences915628
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTCACC4150.002960082112.14821156
AGGCTTA6050.009702546510.358077145
CCAAGGT6450.0074865198.9329053
GTCACCA8200.0058864837.90480337
GTTCAAA10900.0092991666.64558651
CTGAAAG15651.7318432E-46.47997761
CAATCTT12350.0045647976.41487464
CTTCGCC12650.00552087846.298861
CTTTCAT15150.0055695165.73757551
Produced by FastQC (version 0.11.5)