FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585061
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGATCTA1650.003190616621.207557
TACCTTA2258.707282E-418.6610499
CACACGT2350.001165276917.868497
CAATAGG2650.002604507615.8442879
AGCACAC3050.006622610613.7687025
CACGTCT3050.006630112413.7663489
ACACGTC3200.00910202613.1221718
Produced by FastQC (version 0.11.5)