FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460731
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGAA2805.6643694E-620.8837571
CGCTGTA3150.0066450913.7607724
CTTTAAA6607.1502733E-49.9672471
AGTATTT8000.0045770258.1274573
CTTCCAG8150.0048696878.0716361
CTCTTTT10054.386125E-48.0002451
Produced by FastQC (version 0.11.5)