FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1511249
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCAAAT11854.1299063E-57.93049671
GTTTGAT17955.0336894E-87.65181641
CCTTCAT27056.164555E-96.4138581
CAATTCA14655.8941136E-46.3899384
TCACGGA12800.0065477276.19694332
CTACACC14750.00423765375.88118171
TCAGAAC16350.00216798045.73350762
GAATTCT15600.0082250865.5392064
CTTGGAA20459.291013E-45.302411
GTTTTAT21904.062048E-45.28142641
CAAAGCA20700.00109274065.23837141
Produced by FastQC (version 0.11.5)