FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2284357
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACAC10900.00134607847.20549871
GTTAAAA22352.8096965E-66.06979371
GTTCGAG13050.00886782356.0183861
CCCGAAT15900.00175010695.8377311
GTTCAAT22406.6611136E-45.09999561
CCACGCT18300.00918655.0721271
CTTTGAG21400.0020045215.0046691
Produced by FastQC (version 0.11.5)