FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences812423
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCCC1550.001873885623.2440728
ATGGGCG7900.0041904738.2089826
AGAAACC8850.00127590698.1444973
CATGGAT8450.00736168357.7097831
CTTCGAT8650.00907347357.53152231
ACTTTGT8650.0094507517.4972216
Produced by FastQC (version 0.11.5)