FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1463249
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAAATC10105.81566E-58.5574182
GTTAAAT7950.0043798788.1696861
GTTCCAA13151.5335702E-47.13423871
CTCCAGT11650.002427646.8139161
CCTCACC14907.046587E-46.29632471
CTTCGAT12750.0062364466.2260491
CTGAAAC15100.0056035265.73501161
CTCTGGA18050.00113703595.59732961
GTTTCAT19050.00224519065.30350641
CTTTGAT20650.0010824665.24205061
CTTTGAA20800.00119208255.2042471
Produced by FastQC (version 0.11.5)