FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences624042
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTAGA550.004032056360.240498145
CTAAGAA2950.005674099514.0939061
GTCTATG4250.00471658111.4133011
CGGGAAT7300.00292026798.5432241
ACAATAT8250.008950627.54249533
CTCAAAA8300.0092589517.5139211
CATCCGC14000.0037862215.93957471
Produced by FastQC (version 0.11.5)