FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1049245
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACAAC12607.299993E-46.87449741
CTTTGAT17651.8346394E-56.5434311
GTTTCAA15259.2916936E-46.1532391
AATTCCA15200.0062316885.6798555
TTTGATT19555.401987E-45.520592
CTTTATT21250.00157774875.0952161
Produced by FastQC (version 0.11.5)