FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1504120
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAACA7600.00276060248.5980491
CCCCTTC8700.0093069937.5109391
CCCGCCA12757.821494E-46.8334821
GTCAATT10850.0087062136.69177341
CCCTGAT13250.0087233266.02764651
CCTCTTT26551.7124694E-76.01629541
ATACATG13300.00952033055.97683958
GTTCCGT17205.6915067E-45.90976951
CCTGTAC15950.0095883075.4625011
CAAAAAG37102.6684575E-85.2839761
CCCGGAT18200.0070837165.18612431
Produced by FastQC (version 0.11.5)