FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579307
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAT4453.3152133E-412.9838861
GTTTGAT7000.001368719.2857981
CGAAAAT7904.0382828E-49.1421361
CAATTCT7250.0019723868.92071154
GTTTCAA7650.00306712428.4968081
Produced by FastQC (version 0.11.5)