FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences736328
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACTGG5059.5679157E-411.4477881
GTCTGAT6456.4382155E-410.0833721
TCTGATT12054.444238E-47.17883352
CTTCCAG14957.2015944E-46.28384071
ATTTTAA13900.00218663766.2386331
Produced by FastQC (version 0.11.5)