FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416890
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAAGCT2800.0032045915.3575242
CTTTTGG5550.00204753310.44842151
CTTCAAT6100.0044788139.5063511
CAAAAGC7753.208583E-49.3530231
CTTTCCG8400.00688089067.76634841
CTTTTTT14951.200063E-57.2728351
Produced by FastQC (version 0.11.5)