FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1248464
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAGAT6750.00107242969.5388131
CCCAAAA10750.0091788776.65498541
CTTCGCC13850.00235463826.1985071
CTTCAAG15109.1890595E-46.15916731
TCAAGCT14000.00280676926.1021273
CAAAAGA26452.1195956E-75.95048861
CCCGCAG15450.0079429415.556591
CTTCCGC17200.0043383725.4071761
Produced by FastQC (version 0.11.5)