FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences890074
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAA9653.132914E-59.0193011
CTTCAAT11904.169025E-57.92346861
CTGATAA9900.00361105437.32628441
GACCAGC10350.00569203876.9916066
GTTCCAT10700.00768099776.7785251
CAAAAAA25851.4122603E-45.050461
Produced by FastQC (version 0.11.5)