FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013404

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013404
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514477
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGCGA2000.00942600217.5820471
CCCCAAG2850.004089375514.8059331
CTTCGGA5700.0032849289.8706221
CCAGAAC5950.00479724269.4283172
Produced by FastQC (version 0.11.5)