FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497120
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC1150.001117789440.947803145
CCTCGAC3000.00618803715.696658145
CTTTACG4300.005005137511.3220261
CTTTTGG5904.0250216E-410.6092591
TTTGAAC7400.00333852188.417043
CCTTTAT7750.0048436518.0767261
Produced by FastQC (version 0.11.5)