FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1325748
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGAA4100.002557361712.3881971
CTTAAAT8859.709001E-710.6584481
ATTTAAC8609.432541E-48.3976856
CCTATAT10457.2338386E-47.6378351
CTCGAAA11050.00131062367.22311161
CACGCTA2100.00489975377.1018133140-144
CCCGTAT11300.0016610897.0633081
CACAAAT13200.0084426746.046621
GTTTCAA19700.00319133125.1565081
TGATGTT20100.00434156465.0306354
Produced by FastQC (version 0.11.5)