FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1498229
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGAT10751.2082319E-58.7462351
ATATAGC13753.3514563E-57.34553056
GTGCAAT11450.00197635786.94821831
CAAATTT14454.8654436E-46.4917283
ATTTACC12400.0046827646.3998366
CTGTAAT14200.00275774886.1119411
CTTAAAA17005.1491626E-45.95614671
CTTCAAT15850.0014439275.93198871
CTTCCGT16900.0030999265.56343361
AAATCTG15600.0080583415.5495084
CTTGAAA24556.575916E-55.30282451
Produced by FastQC (version 0.11.5)