FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences672225
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATA6054.5847504E-511.3391542
GTCCGAT4600.00904453510.4565321
CTTCAAT8007.5272424E-48.58929351
CTCTTCG7800.0057258887.9285791
CTTGCAG9550.0043027087.1952191
Produced by FastQC (version 0.11.5)