FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences995731
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAACGC4603.1882817E-513.925623
ATAGGCG5602.0087784E-411.4383278
GTCACAG6250.0061249169.1541211
ATATAGG7000.00156659329.1506616
GGAACAT12350.00491334136.36989741
GAAAGGA16300.00230382275.7037761
TTTGATA17800.00685423335.2002922
Produced by FastQC (version 0.11.5)