FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences607924
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCATTT4705.976106E-412.1074031
CTCCAAT4807.1326754E-411.8551651
ATTTGAG4650.00758188110.7078911
CAAGTCC5350.002061647610.4412713
AACAATA6701.0801704E-410.4217912
CAACAAT6558.5682695E-49.7737251
CATGGAA10157.108769E-58.4095751
CCTTGAT10300.00640751056.9059221
Produced by FastQC (version 0.11.5)