FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013458

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013458
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514452
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAACC3150.00860426613.2339588
GTAACCA3200.00954717513.0271779
AAATTGG5150.001562916110.7937916
CTTTGGT5850.00434174679.543041
CTCAAAA6900.00164141629.1021941
GAGAGTC1400.0068634029.029056120-124
Produced by FastQC (version 0.11.5)