FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486241
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGAGA2050.00965609917.5083051
CTATCAC3650.001153978213.7668041
CTCCGAT4300.003952729511.6857761
CCACCAA5009.298245E-411.4854481
ATAAAAA16400.0023620865.69019941
Produced by FastQC (version 0.11.5)