FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4016450
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTAGCT13600.00536871757.0350533145
CCCAAAT21507.802737E-66.0590061
CCCGAAT21402.884909E-45.41095071
ACTCAAG17400.00454216365.38693675
CTTTAAT42153.776222E-95.1509941
CAGTGGG18500.0093138845.066387
CTCTCAA20100.00424149035.04079871
Produced by FastQC (version 0.11.5)