FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491036
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCAAT4151.1739188E-515.4760346
ATTCGCT3200.00800037913.3803216
AAACCAA4855.1059455E-513.2423795
GTTGTAT4150.002913579612.1720221
GGTTGTT4600.006283756310.981281
AAATTTC7953.7376303E-610.7847584
GACTGAT3300.0027245485.624728790-94
Produced by FastQC (version 0.11.5)