FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences683049
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACAAAT5750.002872348810.0327451
GGTAAAT6100.0046814999.4570951
ATTCTGG7350.00220498268.81238656
CTTTGAA10350.0058843656.9671841
GTTTCAT10800.00888067956.6768851
Produced by FastQC (version 0.11.5)