FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1019445
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTAAAC6950.00145913079.2223031
CGAGAAT6500.0087461768.765131
CAACGCT7350.0024273588.720411
CACACGC6600.0099096038.6323241
AGATCTG9200.00218110377.71360644
CAGATCT8550.0097663777.47001843
CTCAAAA11600.00266489046.75330541
CTTTAAT12550.006067486.2420991
ATTACAG14200.00327451556.0183111
CTTTAAA14700.0048142895.81360671
Produced by FastQC (version 0.11.5)