FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451600
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAA4600.007783316510.6692031
AGAAATG6400.0090797488.7232344
TTTGCCG10208.4367505E-47.52592756
CAAGAAA10350.0077121726.7740971
CTTTTTT17450.00648569275.2232361
Produced by FastQC (version 0.11.5)