FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences786880
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTAGA900.00412041931.3948966
TACTCAC2550.007575992518.262106145
CCCAGAT6054.28557E-410.5390271
CTCAAAA8256.4553988E-610.3048271
CTTTAAA9855.174119E-69.3501911
CGTTCAA6200.00619304239.1413781
CTTCGGG9450.00288246877.49689771
CTTTGAA12508.2402E-46.8011851
CTTTCTC12050.00419144436.46724031
Produced by FastQC (version 0.11.5)