FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1043450
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAGG5350.001507303110.8427191
CCCGCAG9000.00142085138.0567431
ATACCCT8300.0064244367.82831958
CTTAAAA13452.3364391E-57.54758071
GTTTATT15051.0273054E-46.74518061
CTTTGAT18704.0022456E-56.2041231
TCAGATT15400.0069114115.6268932
Produced by FastQC (version 0.11.5)