FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences865502
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATTAT11452.7911694E-58.181741
CATATAC9600.0028473397.5064851
TTTAAGA13050.0082071156.06263267
CAAAAAA24702.0965053E-65.8351
TGATATT22104.951211E-45.20723064
Produced by FastQC (version 0.11.5)