FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences953181
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAC4450.0059116311.0735326
TGTAGCA5900.0043393469.5452247
ATTTACC10401.11751215E-58.7995036
CCTCAGA3450.00542581038.194961
GTTTTAA8750.00138427678.07788851
CAAGAAT12451.0076694E-47.38040071
AGATTTA10050.0055885747.0049474
CAATGAA14858.6855434E-46.18760821
Produced by FastQC (version 0.11.5)