FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences760240
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAGA3650.001044858413.9507171
ATATTAG6300.0059552779.1849466
CTCCAAT8550.00782564757.65715931
CTTTGAT14254.8025286E-57.14668271
CTTTGGA10750.00780746436.7667931
ACAATAA12858.907765E-46.75468733
CTTCAAA15150.00531186545.76182371
Produced by FastQC (version 0.11.5)