FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1441245
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4500.00533198611.2287059
ACACGTC4550.005789303711.1053128
GTTTCGT7853.6242825E-49.2435871
ATCCGAT12507.658535E-57.54646351
CAAGTTT12350.00446267856.42939148
CACCGCA15450.00679529645.63589531
CTTTAAT24907.806864E-55.24545671
Produced by FastQC (version 0.11.5)