FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1607662
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGAGCT10600.00737564456.80776261
CCTCAAT12650.00574993066.2749811
GTTTAAT12850.0067674676.17731571
TCAAATT22151.4289597E-55.83537442
TTTAATC16100.00189715745.7981232
GTTCAAT17658.55971E-45.72392031
CATTTAC15650.0083245875.53321031
CCAGAAC17650.00531306685.31506871
CCCGAAA21400.00174053795.0581041
Produced by FastQC (version 0.11.5)