Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005013528 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 632680 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACACGT | 245 | 7.991356E-5 | 19.544546 | 7 |
ACACGTC | 325 | 3.6254714E-5 | 16.838379 | 8 |
CACGTCT | 345 | 0.0010857343 | 13.87946 | 9 |
GAGCACA | 505 | 0.0015100326 | 10.83915 | 4 |
AATTCTT | 615 | 0.0077229138 | 8.89833 | 5 |
AAGAGCA | 825 | 0.009809976 | 7.4654136 | 2 |
GAAGAGC | 1030 | 0.0010913116 | 7.347295 | 1 |
ATAGAGA | 405 | 0.0014437676 | 5.9324317 | 135-139 |
CGATAGA | 405 | 0.0093361335 | 5.476091 | 135-139 |