FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1199117
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTGAT8255.540652E-48.858971
CCCAGAT9552.5425365E-48.418341
CTTCAGG13151.5587259E-57.78107261
CTTCCGT16654.8525166E-56.58436971
CAATAAC12550.00463408566.40598731
CTTTGGA16152.3216737E-46.3356721
CTTTAAT18101.5341095E-46.0568921
CTTTTCC37508.731149E-105.6520231
CTTTGAT22357.78814E-55.55915161
Produced by FastQC (version 0.11.5)