FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences657930
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTAAG5950.00381568289.6942121
TTTAAGA8350.00701797157.75063852
CTTTTAA13401.9491228E-46.99484441
CAAAGAA18050.00114655385.59229851
ATATTCT17550.00523518725.3204986
Produced by FastQC (version 0.11.5)