FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences409597
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTAAC3504.115851E-516.5882821
CCCCAAA2800.002947346515.5515151
TAATTCA4250.003425469211.910984
CCCATTT4450.004703250211.4160921
CTTAAAA4700.00706499510.8088541
CAACAAC6658.1778434E-49.8220081
CTTTTAT8750.00106273648.2941411
GAAAATC8750.00109943658.2657712
Produced by FastQC (version 0.11.5)