FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences965481
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTAGAA6400.0095721658.6689032
TACAATG8450.00118740878.2042693
CTCAAAG9403.540844E-48.1633631
CCTCGCC10850.00163746087.07240631
CTTCAAC12308.1821386E-46.80581861
CTTCGCC13050.00160000056.414681
CAAAAAA16656.255113E-45.86567541
Produced by FastQC (version 0.11.5)