FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559886
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGAA4850.007563629713.4929495145
CCACAAT4900.001032536711.3432011
ATATTGC7800.00533904977.99009856
GTTTTGC8000.00670084737.79034668
CAAAAAA16256.958235E-56.4132711
Produced by FastQC (version 0.11.5)