FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences782648
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGTTC3200.008231685513.324154
TATTAAC4350.004651183311.4352867
CTTCAAA13554.0989835E-78.43312551
ATCACAA10300.0061672936.933791
AGATTTT17901.931364E-45.9549274
AAGATTT17257.748681E-45.767733
CAAAAAG20700.00128112415.175221
Produced by FastQC (version 0.11.5)