FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013563

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013563
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences940966
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGACC1000.006779982228.3546839
CCCCAAT4300.0042078111.5901991
CCCACAT6250.0063540699.1132081
CAAATGT9553.5311768E-48.1653953
CCCGCAA7950.00494302068.060031
TCAACTT9250.00232383337.6638352
CAAAACG10300.0066295946.88257073
GATTCTG12558.5717055E-46.77801235
CAAGATT11900.00349308716.58122971
GTTTTAT15250.00109591236.06924721
CGATTTC12950.00881108556.0212655
AGATTAT14800.0054604285.74787664
Produced by FastQC (version 0.11.5)