FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511035
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAACT2700.002370561216.0687771
CTTGGTT2900.003816323614.9605861
CCCCAAC3100.00594223413.9953861
ATATAAG6200.0052795399.3193016
CAAAGAT8650.0092367077.5154323
AAGATTT10100.00456034767.1516493
Produced by FastQC (version 0.11.5)