FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412878
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGTT1950.00693313618.5433642
GAAAGTC2850.003403005415.2195454
CTTCGAG4502.1387792E-514.5236491
CTTTAAT4400.00430327611.5529021
CTTCCAC5500.001870403110.5626541
Produced by FastQC (version 0.11.5)