FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2555151
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT11150.00144022827.15976571
GTGTAAT14350.00298697226.0689051
GTTTAAA19557.5607706E-55.939561
CTGCAAC32906.0830644E-85.51474141
GTTCAAT23451.7885708E-45.26122761
CTTTGAC30602.6674934E-65.2177381
AAGGCCA21450.00177178925.0516664
CTCCGGA26001.5378598E-45.0243531
Produced by FastQC (version 0.11.5)