FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013616

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013616
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424134
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAACC1000.006193134528.881587
CCTCAAT3507.8589865E-414.4834891
CCTCATT3300.00889484713.1668081
GTCAAGG5300.0014057710.9309351
CCTTGAT5550.002063881610.438551
CTTCAAC4900.00977972910.3453491
CATCAAA6600.0086254658.7778721
CAAAAAA12155.484069E-57.74836871
CTTCAAA8500.0077156087.667731
CTTCTGC10350.0056361626.9968551
Produced by FastQC (version 0.11.5)