FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1257701
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCACAT8050.0057068437.93259141
AACCAGC12450.0065408976.1973775
TCAAATT14950.00679158755.63603642
CAACAAA17650.00106048625.627971
AATATAA26159.2393075E-65.3646695
TTTGTTC17050.0049368485.34815038
CAAAAAT23602.7503795E-45.11099431
AAATCTG18050.00949935.05708074
AATGAAT18250.0095631125.05415961
Produced by FastQC (version 0.11.5)