FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533741
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAACCC950.001378426639.242928145
CAACTAT3552.1683863E-618.4814931
CGTAGAG3052.6263448E-416.7309681
CTCCCAG3950.001863661712.918851
CCTCGAA4805.800734E-412.1498711
TCCTTCC6204.5242484E-410.4760273
CTCAAAA6150.0045748939.4828261
CTTTTTT18059.956278E-45.6542331
Produced by FastQC (version 0.11.5)